rna_cd is now available on PyPI! Simply install the package in your favorite python environment with:

$ pip install rna-cd

This will install both the rna_cd python package, and install two command line tools:

  1. rna_cd-train: For training a model using BAM files.
  2. rna_cd-classify: For classifying new BAM files.

Supported python versions

We only support the following python versions:

  • python 3.5
  • python 3.6
  • python 3.7


Python 2 is not supported in any way. Even attempting to install the package on python 2 will result in failures.